Create README.md
Connect function compatibility
Fixing the incompatibility of divergent / convergent connect function with newer versions of NEST
Add command line options
smoothing rates
updating the analysis script to smooth rates (method: counting the spikes in short windows, 1 ms here; then convolving the spike count / time with a Gaussian kernel to obtain smoothened rates)
Improved plotting
Saving kernelseed & adding average rate plot
Change radius
Updated network export
Analysis script updates
Updated plotting
Updated 3d pos & colours
Add h5 net
Merge pull request #3 from OpenSourceBrain/splitPynn
Split pynn
Fiz error
Improved Pynn net: reduced number of cells in spike populations (only use one for E spikes)
Split pops in E & I
Regenerated
Generate positions in 3D
Test net
Some fixes
Minor updates
More options on pynn
Progress
Initial reimplementation
Adding changes by @sdrsd for testing 500 cell network
Add info on running PyNN