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# Date Author Comment
8d36ca71 18 Aug 2023 22:22 Padraig Gleeson (admin)

Update omv-ci.yml
327c353c 19 Apr 2023 21:54 Padraig Gleeson (admin)

Remove nest 2.20, no longer works
ffb80331 19 Apr 2023 21:12 Padraig Gleeson (admin)

Fix typo
c8fbe932 19 Apr 2023 20:51 Padraig Gleeson (admin)

Update omv-ci.yml
fc8a1b74 19 Apr 2023 19:26 Padraig Gleeson (admin)

Updates for NEST 3.3
7fcce53a 19 Apr 2023 17:35 Padraig Gleeson (admin)

Add validate file
fa9e816d 19 Apr 2023 17:33 Padraig Gleeson (admin)

Regenerate and validate nml
24f52793 04 Apr 2023 20:31 Padraig Gleeson (admin)

Test earlier version pynest
c1596cbb 04 Apr 2023 20:06 Padraig Gleeson (admin)

Fix simulation on pynn nest
2c29b58a 24 Mar 2023 23:27 Padraig Gleeson

Test on 3.9 also
594fafac 27 Apr 2022 01:00 Padraig Gleeson (admin)

Update README.md
9d3ec01d 15 Dec 2021 23:05 Padraig Gleeson (admin)

Update README.md
031c7cff 15 Dec 2021 14:56 Padraig Gleeson (admin)

Fixes for recent numpy - explicit cast to int
3d87afa4 06 Dec 2021 15:32 Padraig Gleeson (admin)

Create omv-ci.yml
3881ed0c 25 Feb 2021 16:10 Padraig Gleeson (admin)

Py3 update
694648f6 09 Oct 2019 22:31 Padraig Gleeson (admin)

Better test
444e5320 08 Oct 2019 23:57 Padraig Gleeson (admin)

Test Nest on scaled down version of network...
3eb5a2ae 18 Jun 2019 20:59 Padraig Gleeson (admin)

No PyNNTextIO and test spike times
460a71b0 18 Jun 2019 20:23 Padraig Gleeson (admin)

Test rate on nest
8631c29a 18 Jun 2019 19:56 Padraig Gleeson (admin)

Use latest omv
ca5b9e60 18 Jun 2019 19:35 Padraig Gleeson (admin)

Test on pynn_neuron
394e7b37 20 Dec 2018 17:03 Padraig Gleeson (admin)

Add licence
e3a96074 09 Oct 2018 18:21 Padraig Gleeson (admin)

Update readme & images
8cd1c539 09 Oct 2018 17:25 Padraig Gleeson (admin)

Updated & retested
27e58135 04 Oct 2018 17:18 Padraig Gleeson (admin)

Create README.md
d205721b 12 Jun 2018 10:47 Sadra Sadeh

Connect function compatibility

Fixing the incompatibility of divergent / convergent connect function with newer versions of NEST
71e74b9b 07 Jun 2018 11:10 Padraig Gleeson (admin)

Add command line options
0a0c74b4 25 May 2018 12:39 Sadra Sadeh

smoothing rates

updating the analysis script to smooth rates (method: counting the spikes in short windows, 1 ms here; then convolving the spike count / time with a Gaussian kernel to obtain smoothened rates)
5ee2aeac 25 May 2018 09:34 Padraig Gleeson (admin)

Improved plotting
d1612ec4 09 May 2018 14:43 Padraig Gleeson (admin)

Saving kernelseed & adding average rate plot
c1cbb8af 25 Apr 2018 14:46 Padraig Gleeson (admin)

Change radius
3c85263e 25 Apr 2018 13:24 Padraig Gleeson (admin)

Updated network export

Analysis script updates
9c4bc950 24 Apr 2018 19:10 Padraig Gleeson (admin)

Updated plotting

Updated 3d pos & colours
ea034c18 24 Apr 2018 14:17 Padraig Gleeson (admin)

Add h5 net
3a5bba19 23 Apr 2018 12:44 Padraig Gleeson (admin)

Merge pull request #3 from OpenSourceBrain/splitPynn

Split pynn
74272c9f 23 Apr 2018 10:32 Padraig Gleeson (admin)

Fiz error
a7b27a59 23 Apr 2018 10:24 Padraig Gleeson (admin)

Improved Pynn net: reduced number of cells in spike populations (only use one for E spikes)
ca5ed91c 20 Apr 2018 17:03 Padraig Gleeson (admin)

Split pops in E & I
01156380 20 Apr 2018 16:54 Padraig Gleeson (admin)

Regenerated
1a1a37ff 20 Apr 2018 12:33 Padraig Gleeson (admin)

Generate positions in 3D
9fe0f3c6 20 Apr 2018 11:53 Padraig Gleeson (admin)

Test net
3c021adf 20 Apr 2018 08:24 Padraig Gleeson (admin)

Some fixes
746b1951 19 Apr 2018 13:45 Padraig Gleeson (admin)

Minor updates
b5281ff8 18 Apr 2018 14:56 Padraig Gleeson (admin)

More options on pynn
04defa43 18 Apr 2018 14:09 Padraig Gleeson (admin)

Minor updates
a4c32321 16 Apr 2018 17:32 Padraig Gleeson (admin)

Progress
bc435bb8 16 Apr 2018 17:00 Padraig Gleeson (admin)

Initial reimplementation
c645de30 10 Apr 2018 17:38 Padraig Gleeson (admin)

Adding changes by @sdrsd for testing 500 cell network
25b60d4b 10 Apr 2018 13:01 Padraig Gleeson (admin)

Add info on running PyNN
3ec5465b 10 Apr 2018 11:04 Padraig Gleeson (admin)

Initial analysis script
cbae35f1 10 Apr 2018 10:20 Padraig Gleeson (admin)

Adding readme info
2eff59a2 20 Feb 2018 10:34 Padraig Gleeson (admin)

Ignoring generated file
9dfc93f5 12 Feb 2018 09:42 Padraig Gleeson (admin)

Update to PyNN version
49d44a37 09 Feb 2018 11:03 Padraig Gleeson (admin)

Improved testing
4039e614 09 Feb 2018 09:06 Padraig Gleeson (admin)

Use branch on omv
6d5eab78 08 Feb 2018 18:38 Padraig Gleeson (admin)

Recording of v from test net

Init Pynn version...
2a178659 08 Feb 2018 13:31 Padraig Gleeson (admin)

Scalable size of network
6113a54a 08 Feb 2018 11:54 Padraig Gleeson (admin)

Fixed test example
4712f6a6 07 Feb 2018 17:03 Padraig Gleeson (admin)

Update README.md
45211375 07 Feb 2018 16:44 Padraig Gleeson (admin)

Not analyse small net
2a558ce6 07 Feb 2018 16:43 Padraig Gleeson (admin)

Even fewer in population...
7fc0c67c 07 Feb 2018 16:21 Padraig Gleeson (admin)

Make fewer trials
9e8dd76a 07 Feb 2018 15:48 Padraig Gleeson (admin)

Try with Nest 2.10
b589f519 07 Feb 2018 15:28 Padraig Gleeson (admin)

Add explict omv test

Add test script with more plotting
3601ebcc 07 Feb 2018 15:06 Padraig Gleeson (admin)

Catch matplotlib errors
054d903c 07 Feb 2018 14:57 Padraig Gleeson (admin)

Baseline tested locally network reproducing Fig 10.
414573c2 07 Feb 2018 11:47 Padraig Gleeson (admin)

Add python tk
d6fb9eb4 07 Feb 2018 11:37 Padraig Gleeson (admin)

Merge branch 'master' of github.com:OpenSourceBrain/SadehEtAl2017-InhibitionStabilizedNetworks

  • 'master' of github.com:OpenSourceBrain/SadehEtAl2017-InhibitionStabilizedNetworks: Update README.md Update README.md
f81db6c6 07 Feb 2018 11:37 Padraig Gleeson (admin)

Initial .travis.yml
433c605b 07 Feb 2018 11:16 Padraig Gleeson (admin)

Update README.md
b9f66a30 07 Feb 2018 11:14 Padraig Gleeson (admin)

Update README.md
b8cc8135 07 Feb 2018 11:09 Padraig Gleeson (admin)

Adding initial code from Figshare

https://figshare.com/articles/Inhibitory_Stabilized_Network_models/4823212
d7701998 07 Feb 2018 11:04 Padraig Gleeson (admin)

Initial commit