started developing methods for the import of network structure to VERTEX
added test2 for pointIzhikevichCell_stepI with two cells and one synaptic connection
updated README in the VERTEX subfolder and testing synaptic connectivity between Izhikevich cells
added a new cell model for the VERTEX based on the LEMS definition of Izhikevich Cell and a new method that transforms Izhikevich model instantiation to the LEMS
added the network of 1000 cells
put images into one folder
added Adex three population model with 21 cells and a new method get_cells_to_display.m for convenient conversion of IDs of the cells for which membrane potentials have to be recorded
Update README.md
Adding scripts to test validity of NeuroML on Travis-CI
Adding image
Adex2pop_1comp_test4 example of three cells does not run
added medium size network based on tutorial 5 except; synapse type was changed to conductance-based
deleted a redundant file
README is changed in the VERTEX folder
existing examples are modified, some where deleted, new methods were added, one compartment Adex cell is exported to LEMS, good match between LEMS and VERTEX
new scripts and files
Merge pull request #10 from OpenSourceBrain/pg_tests
Using filesep to make operating system independent paths
Ignoring geenrated directories
changed paths, also notice that new methods require to specify the directory of VERTEX_Adex_LEMS.xml
testing 2 cell network export to LEMS- VERTEX results diverge from LEMS results. A potential reason - lEMS does not implement synaptic activity.See two different xml files in the test_LEMS subfolder; results produced in LEMS are the same suggesting that only current step inputs drive individual cells
changes to paths in new scripts
new methods and conversion of VERTEX Adex one compartment cells to LEMS
testing one cell one compartment Adex model
deleted test network file and added one compartment cell.nml and network containing these cells